Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
ESCA rs13079478 chr3:46007823 G/T 0 183 13.35 12.5 0.8 KM Plot
ESCA rs13079869 chr3:46008087 G/A 0 183 13.35 12.5 0.8 KM Plot
ESCA rs13115776 chr4:10040189 C/G 4.44E-5 179 8.02 14.32 13.37 KM Plot
ESCA rs13139055 chr4:10038924 G/T 6.83E-5 180 8.1 14.13 13.37 KM Plot
ESCA rs13239959 chr7:47977914 G/A 1.05E-5 181 13.37 13.22 1.53 KM Plot
ESCA rs1331645 chr6:146398407 C/G 2.57E-6 184 13.38 13.6 8.58 KM Plot
ESCA rs1337839 chr6:146010239 A/G 9.15E-5 184 10.1 13.12 13.57 KM Plot
ESCA rs13437042 chr6:146096603 C/G 2.64E-5 184 9.77 13.5 13.57 KM Plot
ESCA rs1357162 chr18:32168851 C/G 1.02E-5 184 13.38 13.03 6.43 KM Plot
ESCA rs138083019 chr1:102911933 C/T 1.08E-6 179 12.98 20.3 2.7 KM Plot
ESCA rs138333566 chr6:146062934 TTGTG/T 8.91E-5 183 10.1 13.02 13.57 KM Plot
ESCA rs138559800 chr7:135233445 T/C 9.11E-5 175 13.03 15.9 4.6 KM Plot
ESCA rs138649856 chr8:8597607 C/T 9.36E-6 177 13.37 13.67 4.37 KM Plot
ESCA rs138688650 chr10:73182757 TC/T 8.04E-5 181 13.4 10.75 3.73 KM Plot
ESCA rs138817157 chr8:120878424 CAATAAATAAATA/C 3.73E-7 184 12.87 18.5 3.73 KM Plot